Molecular Diagrams: Drawing
Drawing biological molecules
- It is important to be able to draw a few key molecules
- There is a huge variety of biological molecules, but only the most important ones are required
- Element symbols from the Periodic Table are used
- A short, straight line is used for a covalent bond, with two lines for a double bond
- Some chemical groups may be denoted by a symbol such as ℗ for a phosphate group
- The symbol R represents a variable chemical group, such as the variable side groups of amino acids
- An exam question may require you to draw various molecules
- It's advisable to break the task down into stages
Symbols Used in Biological Molecule Drawings Table
Drawing α-D-glucose
- Aspects to remember
- Glucose has the formula C6H12O6
- In solid form, glucose has a linear structure
- It forms a hexagonal ring in an aqueous solution
- As aqueous glucose is the only state that glucose exists in biology, it's the ring structure that should be learned
- One of the corners of the ring (draw this in the top-right) is occupied by an oxygen atom
- The 6th carbon occupies a side chain (top-left)
- The carbon atoms are numbered 1 to 6 starting on the right and working clockwise
- The hydroxyl groups occupy positions above or below the ring as follows
- Carbon atom 1 - below
- Carbon atom 2 - below
- Carbon atom 3 - above
- Carbon atom 4 - below
- You can ignore the 'D' in the names alpha-D-glucose or beta-D-glucose
- The only other version is L-glucose which plays no significant role in biology
Recommended steps to draw a molecule of α-D-glucose
Structure of α-D-glucose
β-D-glucose is very slightly different in structure
- Beta-glucose (β-glucose) has a small, subtle difference to α-glucose
- The hydroxyl group on carbon atom 1 sits ABOVE the ring, rather than below
- This sugar is the monomer of cellulose
- This example of two different isomers changes the properties of the polysaccharide formed from these monomers drastically
- It accounts for all the many differences between starch and cellulose
- The hydroxyl groups occupy positions above or below the ring as follows
- Carbon atom 1 - above
- Carbon atom 2 - below
- Carbon atom 3 - above
- Carbon atom 4 - below
Structure of β-D-glucose
Drawing a ribose sugar
- This family of sugars play a role in DNA and RNA structure, as well as ATP
- Ribose is a form of pentose sugar (5 carbon atoms)
- Like glucose, ribose has a ring structure
- Aspects to remember
- Ribose has the formula C5H10O5
- It forms a pentagonal ring in an aqueous solution
- One of the corners of the ring (draw this in the top) is occupied by an oxygen atom
- The 5th carbon occupies a side chain (top-left)
- The carbon atoms are numbered 1 to 5 starting on the right and working clockwise
- The hydroxyl groups occupy positions above or below the ring as follows
- Carbon atom 1 - above
- Carbon atom 2 - below
- Carbon atom 3 - below
- Ribose sugars have an important close relative - deoxyribose sugars
- Both are key components of RNA and DNA respectively
- The 'R' and 'D' of RNA and DNA comes from the sugar in the structure, ribose or deoxyribose
Recommended steps to draw a molecule of ribose
Structure of ribose
Drawing a saturated fatty acid
- There are two aspects to a saturated fatty acid
- A saturated hydrocarbon chain
- Contains only C-C single bonds
- Each internal carbon atom is bonded to 2 hydrogen atoms
- A carboxylic acid group at one end
- A saturated hydrocarbon chain
- You don't need to memorise any names of saturated fatty acids
- The number of carbon atoms in your chain is also not important, but greater than around 8 is advised.
Recommended steps to draw a molecule of a saturated fatty acid
A saturated fatty acid
Drawing a generalised amino acid
- Each amino acid has central carbon atom
- Three of the bonds from the central carbon atom are occupied as follows
- a hydrogen atom
- a carboxylic acid group
- an amine group
- The fourth bond attaches the central carbon to the R group
- The R group is variable and determines the identity of the amino acid
- You won't need to remember any of the R groups or amino acid names
- Drawing the 4 groups surrounding the central carbon in a flat structure is acceptable, although the real arrangement of bonds around a carbon atom is in a tetrahedral shape
Recommended steps to draw a molecule of generalised amino acid
The generalised structure of an amino acid
Examiner Tip
The specification is very clear about what you should remember and equally importantly, what you don't have to memorise in this topic.With all these drawings, practise with a pencil and plenty of paper until you get it right. It WILL stick! Once you've memorised it, 'draw' questions should be easy marks!