Subcellular Components (College Board AP® Biology): Study Guide
Subcellular components & organelles
Eukaryotic and prokaryotic cells contain many subcellular structures and organelles
Eukaryotic cells have a more complex ultrastructure than prokaryotic cells
The cytoplasm of eukaryotic cells is divided up into membrane-bound compartments called organelles, which provide compartmentalization and organize cellular products
Ribosomes
Ribosomes are found in all cells, prokaryotic and eukaryotic
This fact supports the view that all life forms share a common ancestry
Either freely in the cytoplasm (of all cells)
Or bound to the endoplasmic reticulum (ER) to form rough ER (only in eukaryotic cells)
Ribosomes are the site of protein synthesis; they bind to mRNA
They consist of a large and a small subunit composed of protein and ribosomal RNA (rRNA)
Protein provides structure to the ribosome
rRNA facilitates the binding of mRNA and tRNA and catalyzes the formation of peptide bonds between amino acids

Endoplasmic reticulum
The endoplasmic reticulum (ER) is a series of membrane-bound channels in the cytoplasm of eukaryotic cells
There are two types of ER:
Rough Endoplasmic Reticulum (RER)
The surface is studded with ribosomes
Formed from continuous folds of membrane continuous with the nuclear envelope
Helps to compartmentalize the cell
Its role is to process proteins made by the ribosomes
Smooth Endoplasmic Reticulum (ER)
Does not have ribosomes on the surface; its function is distinct from the RER
ER is involved in the production, processing and storage of lipids, carbohydrates and steroids as well as detoxification

The Golgi complex
The Golgi complex is a membrane-bound structure that consists of a series of flattened membrane sacs (called cisternae)
Flattened sacs of the membrane are similar to the smooth endoplasmic reticulum
The interior part of each cisterna, the lumen, holds the necessary enzymes for the Golgi to function
The Golgi modifies proteins and lipids before packaging them into Golgi vesicles
Vesicles then transport the proteins and lipids to their required destinations
Proteins that go through the Golgi apparatus go through a number of processes referred to as protein trafficking:
Exported (e.g., hormones such as insulin)
Put into lysosomes (such as hydrolytic enzymes)
Delivered to membrane-bound organelles
The Golgi complex is responsible for glycosylation and other chemical modifications of proteins
During the process of glycosylation, sugar molecules are attached to proteins and lipids which determines protein function or targeting

Mitochondria
Mitochondria are the site of chemical respiration within eukaryotic cells
A double membrane surrounds each mitochondrion
The inner membrane is highly folded to form cristae
The outer membrane is smooth
The double membrane allows proton gradients to form across the membranes for the production of ATP
The internal part of the mitochondrion (the matrix) contains enzymes needed for chemical respiration
Small circular pieces of DNA, mitochondrial DNA (mtDNA) and ribosomes are also found in the matrix (needed for replication of mitochondria)

Chloroplasts
Chloroplasts are found in green plants and photosynthetic algae
Chloroplasts are larger than mitochondria and are also surrounded by a double membrane
Membrane-bound compartments called thylakoids containing chlorophyll stack to form structures called grana
They resemble a stack of pancakes
Grana are joined together by lamellae (thin and flat thylakoid membranes)
Chloroplasts are the site of photosynthesis:
The light-dependent stage takes place in the thylakoids
The light-independent stage (Calvin cycle) takes place in the stroma
Chloroplasts also contain small circular pieces of DNA and ribosomes used to synthesize the proteins needed in chloroplast replication and photosynthesis

Examiner Tips and Tricks
The structures of mitochondria and chloroplasts resemble microorganisms in many ways. The topic of endosymbiosis puts forward a theory that these organelles originated from primitive microorganisms and became incorporated into larger, eukaryotic organisms. This theory is explored in more detail in Origins of Compartmentalization
Lysosomes
Lysosomes are membrane-enclosed sacs which contain hydrolytic enzymes
They have three main roles:
To break down waste materials such as worn-out organelles
Roles within cells of the immune system to destroy pathogens
In apoptosis

Vacuoles
A vacuole is a membrane-bound sac, most often found in plant cells
The vacuole contents are chemically different to that of the cytoplasm
Vacuoles have several distinct roles:
As a cellular storage of water, helping to maintain water balance in the plant
To keep the cell turgid, filling with water and exerting pressure on the cell wall, giving the plant's tissues structural strength
Some vacuoles contain colored pigments that give the plant its characteristic color
Other plant species store bitter/astringent compounds in the vacuole that deter insects/other animals
They can often be a place where waste products are sequestered (temporarily stored before excretion from the cell)
A vacuole can sometimes take up most of the inner volume (around 80%) of a plant cell
Vacuoles in animal cells are not permanent and are small
Their role in animals is as a temporary store of metabolites or for the transport of substances

Examiner Tips and Tricks
It is important to note that both lysosomes and vacuoles are bound by a membrane and that these membranes are highly selectively permeable. This enables the plant to compartmentalize its contents effectively
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