Gene Control: Transcription Factors (Cambridge (CIE) A Level Biology): Revision Note

Exam code: 9700

Cara Head

Written by: Cara Head

Reviewed by: Alistair Marjot

Updated on

Gene control: transcription factors

  • Prokaryotes use operons to control the expression of genes in cells

  • Eukaryotes also use transcription factors to control gene expression

  • A transcription factor is a protein that controls the transcription of genes by binding to a specific region of DNA

  • They ensure that genes are being expressed in the correct cells, at the correct time and to the right level

  • It is estimated that ~10% of human genes code for transcription factors

    • There are several types of transcription factors that have varying effects on gene expression

    • This is still a relatively young area of research and scientists are working hard to understand how all the different transcription factors function

    • Transcription factors allow organisms to respond to their environment

    • Some hormones achieve their effect via transcription factors

How transcription factors work

  • Some transcription factors bind to the promoter region of a gene

    • This binding can either allow or prevent the transcription of the gene from taking place

  • The presence of a transcription factor will either increase or decrease the rate of transcription of a gene

  • For example, PIF is a transcription factor found in plants that activates the transcription of the amylase gene

Diagram showing genomic DNA with labelled promoter, transcription factor, RNA polymerase, mRNA and direction of transcription, illustrating gene transcription.
A transcription factor binding to the promoter region of a gene which allows RNA polymerase to bind and for transcription to occur

Gene control: gibberellin

  • Plant cells use transcription factors in a similar way to animal cells

  • Gibberellin is a hormone found in plants (e.g. wheat and barley) that controls seed germination by stimulating the synthesis of the enzyme amylase

  • It does this by influencing transcription of the amylase gene

    • When gibberellin is applied to a germinating seed there is an increased amount of the mRNA for amylase present

Mechanism for gene control by gibberellin

  • The breakdown of DELLA protein by gibberellin is necessary for the synthesis of amylase

  • The following components are involved:

    • Repressor protein DELLA

    • Transcription factor PIF

    • Promoter of amylase gene

    • Amylase gene

    • Gibberellin

    • Gibberellin receptor and enzyme

  • The process occurs as follows:

    • DELLA protein is bound to PIF, preventing it from binding to the promoter of the amylase gene so no transcription can occur

    • Gibberellin binds to a gibberellin receptor and enzyme which starts the breakdown of DELLA

    • PIF is no longer bound to DELLA protein and so it binds to the promoter of the amylase gene

    • Transcription of amylase gene begins

    • Amylase is produced

Flowchart of DELLA repressor protein regulating PIF transcription factor, showing gibberellin triggering DELLA breakdown to start transcription.
The breakdown of DELLA protein by Gibberellin allows the transcription factor PIF to bind to the promoter for the amylase gene and for transcription to initiate

Examiner Tips and Tricks

In your exam you may be asked to explain why RNA analysis is important with regards to gene expression. From the outside most cells look almost identical with the same DNA in their nucleus. However we know that they are most likely expressing different genes.

When a cell expresses a gene, RNA is produced by transcription. This RNA present in a cell can be analysed. Scientists can match the RNA present in a cell to specific genes and work out which genes are being expressed in that specific cell.

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Cara Head

Author: Cara Head

Expertise: Biology & Psychology Content Creator

Cara graduated from the University of Exeter in 2005 with a degree in Biological Sciences. She has fifteen years of experience teaching the Sciences at KS3 to KS5, and Psychology at A-Level. Cara has taught in a range of secondary schools across the South West of England before joining the team at SME. Cara is passionate about Biology and creating resources that bring the subject alive and deepen students' understanding

Alistair Marjot

Reviewer: Alistair Marjot

Expertise: Environmental Systems and Societies & Biology Content Creator

Alistair graduated from Oxford University with a degree in Biological Sciences. He has taught GCSE/IGCSE Biology, as well as Biology and Environmental Systems & Societies for the International Baccalaureate Diploma Programme. While teaching in Oxford, Alistair completed his MA Education as Head of Department for Environmental Systems & Societies. Alistair has continued to pursue his interests in ecology and environmental science, recently gaining an MSc in Wildlife Biology & Conservation with Edinburgh Napier University.